agatha.util.test_umls_util module

agatha.util.test_umls_util.TEST_MRCONSO_PATH = PosixPath('test_data/tiny_MRCONSO.RRF')

tiny_MRCONSO

Only contains the top-1000 lines from 2020AA Only contains the following UMLS terms:

agatha.util.test_umls_util.test_codes_with_minimum_edit_distance()
agatha.util.test_umls_util.test_create_umls_index()
agatha.util.test_umls_util.test_create_umls_index_filter()
agatha.util.test_umls_util.test_filter_atoms_code_subset()
agatha.util.test_umls_util.test_filter_atoms_language_eng()
agatha.util.test_umls_util.test_filter_atoms_suppress_content()
agatha.util.test_umls_util.test_find_codes()
agatha.util.test_umls_util.test_has_code()
agatha.util.test_umls_util.test_has_pref_text()
agatha.util.test_umls_util.test_parse_first_line()
agatha.util.test_umls_util.test_parse_mrconso()

Need to parse all 1000 lines of TEST_MRCONSO_PATH