agatha.util.test_umls_util module¶
-
agatha.util.test_umls_util.TEST_MRCONSO_PATH= PosixPath('test_data/tiny_MRCONSO.RRF')¶ tiny_MRCONSO
Only contains the top-1000 lines from 2020AA Only contains the following UMLS terms:
-
agatha.util.test_umls_util.test_codes_with_minimum_edit_distance()¶
-
agatha.util.test_umls_util.test_create_umls_index()¶
-
agatha.util.test_umls_util.test_create_umls_index_filter()¶
-
agatha.util.test_umls_util.test_filter_atoms_code_subset()¶
-
agatha.util.test_umls_util.test_filter_atoms_language_eng()¶
-
agatha.util.test_umls_util.test_filter_atoms_suppress_content()¶
-
agatha.util.test_umls_util.test_find_codes()¶
-
agatha.util.test_umls_util.test_has_code()¶
-
agatha.util.test_umls_util.test_has_pref_text()¶
-
agatha.util.test_umls_util.test_parse_first_line()¶
-
agatha.util.test_umls_util.test_parse_mrconso()¶ Need to parse all 1000 lines of TEST_MRCONSO_PATH