agatha.util.test_umls_util module¶
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agatha.util.test_umls_util.
TEST_MRCONSO_PATH
= PosixPath('test_data/tiny_MRCONSO.RRF')¶ tiny_MRCONSO
Only contains the top-1000 lines from 2020AA Only contains the following UMLS terms:
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agatha.util.test_umls_util.
test_codes_with_minimum_edit_distance
()¶
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agatha.util.test_umls_util.
test_create_umls_index
()¶
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agatha.util.test_umls_util.
test_create_umls_index_filter
()¶
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agatha.util.test_umls_util.
test_filter_atoms_code_subset
()¶
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agatha.util.test_umls_util.
test_filter_atoms_language_eng
()¶
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agatha.util.test_umls_util.
test_filter_atoms_suppress_content
()¶
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agatha.util.test_umls_util.
test_find_codes
()¶
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agatha.util.test_umls_util.
test_has_code
()¶
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agatha.util.test_umls_util.
test_has_pref_text
()¶
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agatha.util.test_umls_util.
test_parse_first_line
()¶
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agatha.util.test_umls_util.
test_parse_mrconso
()¶ Need to parse all 1000 lines of TEST_MRCONSO_PATH